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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943987.1_cds_XP_016486932.1_77721
CDS Infomation

[gene=LOC107807128] [db_xref=GeneID:107807128] [protein=omega-3 fatty acid desaturase, chloroplastic-like] [protein_id=XP_016486932.1] [location=join(67655..68148,68253..68342,68429..68495,68565..68657,68758..68943,69060..69140,69368..69505,69610..69789)] [gbkey=CDS]
Sequence

ATGGCAAGTTGGGTTTTATCAGAATGTGGTCTTAGACCACTCCCAAGAATCTACCCAAAG
CCTAGAACAGGGACAACCACTTTTGCCTCTCACATAAAGTTGAGAATTTCACGTACAGAT
CTGAGTGGTTCTTCAATTTCTTTGTCCAATATTAATAAAGAGAGGAATTGGGCATTAAGG
GTAAGTGCACCACTTAGGATCCAAACTGTCGGAGAAGAGGGAAGTGAGAGAACAACAGAT
AATAATAATGGTGGTGAGTTTTTTGACCCAGGGACACCCCCACCATTTAAGTTGTCTGAT
ATTAGGGCAGCTATTCCTAAGCATTGTTGGGTCAAGAATCCATGGAAATCTATGAGTTAT
GTTGTGAGGGATGTTGCTATTGTATTTGGATTGGCAGCTGCGGCTGCTTATTTCAACAAT
TGGGTTGTTTGGCCTTTGTACTGGTTTGCTCAGAGTACGATGTTTTGGGCTCTCTTTGTT
CTTGGTCATGATTGTGGACATGGAAGTTTTTCAAATAACCACAAGTTGAATAGTGTTGTT
GGACATATACTTCATTCTTCAATTCTTGTTCCTTACCATGGATGGAGAATAAGCCATAGG
ACACATCACCAGAACCATGGACACGTTGAGAATGATGAGTCATGGCATCCTATACCCGAG
AAGATTTACAATAGTTTGGATCTTGCCACAAAGAAATTAAGGTTCACTCTACCCTTTCCC
TTGTTGGCATACCCTTTCTATCTGTGGAGTAGAAGCCCTGGAAAGAAAGGGTCTCACTTT
GATCCAAACAGTGATTTGTTTGTTCCAAGTGAGAAGAAAGATGTGATGACTTCAACTCTG
TGTTGGACAGCAATGGCTGCATTGCTAGTGGGATTGTCCTTTGTAATGGGTCCTTTCCAA
GTGCTTAAGCTCTATGGCATCCCCTATTGGGGCTTTGTCATGTGGCTTGACTTAGTTACC
TACTTGCATCACCATGGTCATGATGATAAACTTCCTTGGTACAGAGGAGAGGAATGGAGT
TATCTTAGAGGAGGGCTTACAACGCTTGATCGCGATTATGGATGGATTAACAACATCCAC
CATGACATAGGAACACATGTGATACATCATCTCTTCCCTCAAATCCCACACTATCATTTA
GTGGAAGCAACTGAAGCAGCTAAGCCAGTGCTAGGGAAGTATTATAAGGAGCCAAAGAAG
TCAGGGCCTCTACCATTTTACTTGTTGGGAGTTCTCATAAAGAGTATGAAGCAGGATCAC
TATGTGAGTGACACTGGTGATATAGTATATTACCAAACTGATCCCCAACTCTCTGGGTCT
CAGAAATAG

Peptide Sequence

PEP ID

XP_016486932.1
PEP Infomation

PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Nicotiana tabacum]
Sequence

MASWVLSECGLRPLPRIYPKPRTGTTTFASHIKLRISRTDLSGSSISLSNINKERNWALR
VSAPLRIQTVGEEGSERTTDNNNGGEFFDPGTPPPFKLSDIRAAIPKHCWVKNPWKSMSY
VVRDVAIVFGLAAAAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNNHKLNSVV
GHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPIPEKIYNSLDLATKKLRFTLPFP
LLAYPFYLWSRSPGKKGSHFDPNSDLFVPSEKKDVMTSTLCWTAMAALLVGLSFVMGPFQ
VLKLYGIPYWGFVMWLDLVTYLHHHGHDDKLPWYRGEEWSYLRGGLTTLDRDYGWINNIH
HDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPKKSGPLPFYLLGVLIKSMKQDH
YVSDTGDIVYYQTDPQLSGSQK

Transcript Sequence

Gene sequence data has not been registered.